Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015912686.1_cds_XP_016462768.1_55958
CDS Infomation

[gene=LOC107785890] [db_xref=GeneID:107785890] [protein=premnaspirodiene oxygenase-like] [protein_id=XP_016462768.1] [location=join(3440..4342,4461..4986,14212..14300)] [gbkey=CDS]
Sequence

ATGGAGATCATTCATTTCACTACTTTCAATTTTATTGCACTGCTCATCTTCTTTTCCTTC
CTTTTTGTTCTACTTGATAAGAGAAATAAATCAAAACAACAAAAGTTGCCTCCAGGTCCA
TGGACACTCCCCCTTATTGGAAGTATCCATCACTTGAGAGGAGCATTTCCACATCGTACT
CTTAGAAAATTAGCAAGAAAGTATGGTCCTATCATGTATTTGCAACTTGGAGAAATTCCT
GCAGTAGTCATATCATCACCTATTATGGCAAAACAAGTTCTAAAATCTCACGAACTTGCC
TTCACTTCTAAGCCACAACTTACATCCATAGCCATTAATACATACAATTATAAGGACATT
GCATTTGCACCCTATGGTGACAATTGGCGAGAAATGCGTAACATATGTGTTACAGAACTT
TTAAGTGCCAAGATGGTTAAGTCTTTTAGTTCAATTCGGAATGATGAGATTTCAAGTCTC
GTTTCATCAATTCGATCCATGAATGGTTCTGTTGTCAACGTAACAAAAGAAATCCTTCGA
TTTACAAACTCTGTCACGTGTAGATCAGCTTTCGGAAAAGTAAACCAAGATCAAGACGAG
TTGATCAATTTGTTGAGGGAAGTACTGGATACATTAGGAGGATTTGCTGTGGCTGATTTG
TTCCCTTCTTGGAAGTTACTTCACAAGATAAGTGGGGTGAAGTCGAGATTGTTAAAACTA
CATCAGAAGGTTGATGCAGCTCTGGAGAACATACTGAATGAGCATATTAAGAATGGAGCA
CTCGGAAGCAAGGGAAATGGTGAGTTTGGAGGTGAAGATTTGGTTGATGTTCTCCTAAGA
ATTCAGGAGAATGGTGAATTCCAATTTCCACTCACAAATGATCACATAAAAGCAGTAATT
TCTGACATGTTTGTTGCTGGAATAGAAACTTCAGCTGCCGTTATTACTTGTGCATTATCG
GAATTGATGAGGAACCCAAATATTATGGCCAAGGCACAAAGTGAAGTGAGACAAGTCTTC
AAAGGAAAGACAAGTTTTGATGAAAAAGATCTTGATAAATTGTCATACCTAAAGTTAGTT
ATTAAAGAAACGTTAAGGCTACATCCTCCAAGTCCTTTTCTGCCCAGGCAATGTACGAAA
CAAACATATGTTGATGGATATAAAATACCTCCCAAGACCAGAGTACTAATCAATTCATGG
GCACTTGGAAGAGATCCAAAAAGTTGGCAGGACCCTGAGAGTTTTATACCAGAGAGATTT
GAAAAATCTTCTATTGACTTTATGGGAAATCACTTTCAGTTTATTCCATTTGGTGCAGGA
AAAAGGATTTGTCCAGGAATGCAATTTGGTTTAGCTAATGTTAAACATCCTTTGGCTCGG
CTCCTCTACCACTTTAATTGGGCACTTCCATATGGAATTAGTCCAGAAGATCTAATTGAA
AAGGATGGATTAAGTGCAGCGAAACAAAAAGATCTGTGCTTAATTGCCATAGATTACAGA
ATCGATGAATTTTTTTGA

Peptide Sequence

PEP ID

XP_016462768.1
PEP Infomation

PREDICTED: premnaspirodiene oxygenase-like [Nicotiana tabacum]
Sequence

MEIIHFTTFNFIALLIFFSFLFVLLDKRNKSKQQKLPPGPWTLPLIGSIHHLRGAFPHRT
LRKLARKYGPIMYLQLGEIPAVVISSPIMAKQVLKSHELAFTSKPQLTSIAINTYNYKDI
AFAPYGDNWREMRNICVTELLSAKMVKSFSSIRNDEISSLVSSIRSMNGSVVNVTKEILR
FTNSVTCRSAFGKVNQDQDELINLLREVLDTLGGFAVADLFPSWKLLHKISGVKSRLLKL
HQKVDAALENILNEHIKNGALGSKGNGEFGGEDLVDVLLRIQENGEFQFPLTNDHIKAVI
SDMFVAGIETSAAVITCALSELMRNPNIMAKAQSEVRQVFKGKTSFDEKDLDKLSYLKLV
IKETLRLHPPSPFLPRQCTKQTYVDGYKIPPKTRVLINSWALGRDPKSWQDPESFIPERF
EKSSIDFMGNHFQFIPFGAGKRICPGMQFGLANVKHPLARLLYHFNWALPYGISPEDLIE
KDGLSAAKQKDLCLIAIDYRIDEFF

Transcript Sequence

Gene sequence data has not been registered.